Submitting many jobs

In this example, we will focus on how to get input files into our jobs, and how to collect output.

Again, we need a file to describe our job, and an actual job payload.

Save the following into a file of your choosing or use the file CentOS7_lotto.jdl from the repository.

Executable = check_lotto.sh
Arguments  = $(Process)
Universe   = vanilla

# Specify files to be transferred (please note that files on a shared filesystem should not be transferred!!!)
# Should executable be transferred from the submit node to the job working directory on the worker node?
Transfer_executable     = True

Error                   = logs/err.$(ClusterId).$(Process)
Input                   = lotto_sheets
Output                  = logs/out.$(ClusterId).$(Process)
Log                     = logs/log.$(ClusterId).$(Process)

Transfer_Output_Files   = lotto_results

+ContainerOS="CentOS7"

Request_cpus = 1
Request_memory = 1 GB
Request_disk = 10 MB

Queue 52

Save the following into a file of your choosing or use the file check_lotto.sh from the repository.

#!/bin/bash
source /etc/profile
set -e
CLUSTER_ID=$1

mkdir lotto_results
shuf -i 1-49 -n 6 > lotto_random.txt

for sheet in lotto_sheets/*.txt; do
		COR_NUMS=0
		for NUM in $(cat lotto_random.txt); do
				egrep -q "^${NUM}$" ${sheet} && COR_NUMS=$((COR_NUMS+1))
		done
		echo ${COR_NUMS} >> lotto_results/${CLUSTER_ID}.txt
done

Please check that the shell script is executable - if not, run chmod +x check_lotto.sh.

As you may have guessed, we are going to play a small lottery game here. This simulates a weekly lottery, and 52 draws are done, a single one per job. Please create the directory lotto_sheets and prepare your lucky numbers in it. You should create at least one file with exactly 6 numbers (one per line) in it. The numbers should range between 1 and 49. Name the file with the extension .txt. You can also create multiple files if you have more than one set of lucky numbers.

Submit the job as follows and check what happens:

$ condor_submit CentOS7_lotto.jdl 
Submitting job(s)....................................................
52 job(s) submitted to cluster 51.

What is happening? Where do you expect to find files on your submit machine?

Check out your results

Ignoring any special rules, you basically win something if at least 3 numbers were guessed correctly. Did you win something?

Check out your result files:

cat lotto_results/*.txt | sort -n | uniq -c

What exactly does this command show? If in doubt, please ask!

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